get_methods_correlation_distanceR Documentation

Show the methods for calculating correlation or distance

Description

This function outputs the methods available for the calculation of the correlation or distance. The standard correlation methods use stats::cor and a wide variety of distance methods are available using the philentropy package. To be used as input in calculate_expression_similarity_counts or calculate_expression_similarity_transcript.

Usage

get_methods_correlation_distance(names = TRUE)

Arguments

names

whether to output names (default) or characterisation as similarity or dissimilarity (used internally to invert dissimilarity measures)

Value

A character vector of options for the method arguement of the similarity calculation; if names=FALSE, a vector of types (similarity/dissimilarity measure) of the same length

Examples

get_methods_correlation_distance()