R: Plot histogram of assemblage performances by assembly motif

plot_motifs_histo

R Documentation

Plot histogram of assemblage performances by assembly motif

Description

Plot the histogram of performances of all assemblage, and the density curves of performances sorted by assembly motif

Usage

plot_motifs_histo(fobs, assMotif,
                  nbar    = 0,
                  main     = "",
                  opt.mean = "amean")

Arguments

`fobs`	numeric vector. The vector contains observed assemblage performances.
`assMotif`	an integer vector of `length(fobs)`. The vector contains the labels of each assemblages. The labels are only used to plot the assemblage performances that share a same assembly motif with a same symbol and color.
`nbar`	an integer. It is the number of wished bars of histogram.
`main`	a string. The string is used as graph title.
`opt.mean`	a character equals to `"amean"` or `"gmean"`. Switch to arithmetic formula if `opt.mean = "amean"`. Switch to geometric formula if `opt.mean = "gmean"`.

Details

A colour is assigned to each assembl motif. The density curve of each assembly motif and its mean are plotted. The location of each observation is reported on the graph bottom.

Value

Nothing. It is a procedure.