Other packages > Find by keyword >

rrda  

Ridge Redundancy Analysis for High-Dimensional Omics Data
View on CRAN: Click here


Download and install rrda package within the R console
Install from CRAN:
install.packages("rrda")

Install from Github:
library("remotes")
install_github("cran/rrda")

Install by package version:
library("remotes")
install_version("rrda", "0.1.1")



Attach the package and use:
library("rrda")
Maintained by
Julie Aubert
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2025-04-29
Latest Update: 2025-04-29
Description:
Efficient framework for ridge redundancy analysis (rrda), tailored for high-dimensional omics datasets where the number of predictors exceeds the number of samples. The method leverages Singular Value Decomposition (SVD) to avoid direct inversion of the covariance matrix, enhancing scalability and performance. It also introduces a memory-efficient storage strategy for coefficient matrices, enabling practical use in large-scale applications. The package supports cross-validation for selecting regularization parameters and reduced-rank dimensions, making it a robust and flexible tool for multivariate analysis in omics research. Please refer to our article (Yoshioka et al., 2025) for more details.
How to cite:
Julie Aubert (2025). rrda: Ridge Redundancy Analysis for High-Dimensional Omics Data. R package version 0.1.1, https://cran.r-project.org/web/packages/rrda. Accessed 08 May. 2025.
Previous versions and publish date:
No previous versions
Other packages that cited rrda R package
View rrda citation profile
Other R packages that rrda depends, imports, suggests or enhances
Complete documentation for rrda
Functions, R codes and Examples using the rrda R package
Full rrda package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
gaussDiff  
Difference measures for multivariate Gaussian probability density functions
A collection difference measures for multivariate Gaussian probability density functions, such as t ...
Download / Learn more Package Citations See dependency  
MultiATSM  
Multicountry Term Structure of Interest Rates Models
Estimation routines for several classes of affine term structure of interest rates models. All the m ...
Download / Learn more Package Citations See dependency  
MXM  
Feature Selection (Including Multiple Solutions) and Bayesian Networks
Many feature selection methods for a wide range of response variables, including minimal, statistica ...
Download / Learn more Package Citations See dependency  
trajr  
Animal Trajectory Analysis
A toolbox to assist with statistical analysis of animal trajectories. It provides simple access to a ...
Download / Learn more Package Citations See dependency  
gms  
'GAMS' Modularization Support Package
A collection of tools to create, use and maintain modularized model code written in the modeling la ...
Download / Learn more Package Citations See dependency  

24,205

R Packages

207,311

Dependencies

65,312

Author Associations

24,206

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA