Other packages > Find by keyword >

PopComm  

Population-Level Cell-Cell Communication Analysis Tools
View on CRAN: Click here


Download and install PopComm package within the R console
Install from CRAN:
install.packages("PopComm")

Install from Github:
library("remotes")
install_github("cran/PopComm")

Install by package version:
library("remotes")
install_version("PopComm", "0.1.0.1")



Attach the package and use:
library("PopComm")
Maintained by
Zheng Gong
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2025-04-25
Latest Update: 2025-04-25
Description:
Facilitates population-level analysis of ligand-receptor (LR) interactions using large-scale single-cell transcriptomic data. Identifies significant LR pairs and quantifies their interactions through correlation-based filtering and projection score computations. Designed for large-sample single-cell studies, the package employs statistical modeling, including linear regression, to investigate LR relationships between cell types. It provides a systematic framework for understanding cell-cell communication, uncovering regulatory interactions and signaling mechanisms. Offers tools for LR pair-level, sample-level, and differential interaction analyses, with comprehensive visualization support to aid biological interpretation. The methodology is described in a manuscript currently under review and will be referenced here once published or publicly available.
How to cite:
Zheng Gong (2025). PopComm: Population-Level Cell-Cell Communication Analysis Tools. R package version 0.1.0.1, https://cran.r-project.org/web/packages/PopComm. Accessed 08 May. 2025.
Previous versions and publish date:
No previous versions
Other packages that cited PopComm R package
View PopComm citation profile
Other R packages that PopComm depends, imports, suggests or enhances
Complete documentation for PopComm
Functions, R codes and Examples using the PopComm R package
Full PopComm package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

MultiATSM  
Multicountry Term Structure of Interest Rates Models
Estimation routines for several classes of affine term structure of interest rates models. All the m ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
MXM  
Feature Selection (Including Multiple Solutions) and Bayesian Networks
Many feature selection methods for a wide range of response variables, including minimal, statistica ...
Download / Learn more Package Citations See dependency  
trajr  
Animal Trajectory Analysis
A toolbox to assist with statistical analysis of animal trajectories. It provides simple access to a ...
Download / Learn more Package Citations See dependency  
gaussDiff  
Difference measures for multivariate Gaussian probability density functions
A collection difference measures for multivariate Gaussian probability density functions, such as t ...
Download / Learn more Package Citations See dependency  
gms  
'GAMS' Modularization Support Package
A collection of tools to create, use and maintain modularized model code written in the modeling la ...
Download / Learn more Package Citations See dependency  

24,205

R Packages

207,311

Dependencies

65,312

Author Associations

24,206

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA