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NEONiso  

Tools to Calibrate and Work with NEON Atmospheric Isotope Data
View on CRAN: Click here


Download and install NEONiso package within the R console
Install from CRAN:
install.packages("NEONiso")

Install from Github:
library("remotes")
install_github("cran/NEONiso")

Install by package version:
library("remotes")
install_version("NEONiso", "0.7.2")



Attach the package and use:
library("NEONiso")
Maintained by
Rich Fiorella
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-03-19
Latest Update: 2023-09-20
Description:
Functions for downloading, calibrating, and analyzing atmospheric isotope data bundled into the eddy covariance data products of the National Ecological Observatory Network (NEON) . Calibration tools are provided for carbon and water isotope products. Carbon isotope calibration details are found in Fiorella et al. (2021) , and the readme file at . Tools for calibrating water isotope products have been added as of 0.6.0, but have known deficiencies and should be considered very experimental currently.
How to cite:
Rich Fiorella (2021). NEONiso: Tools to Calibrate and Work with NEON Atmospheric Isotope Data. R package version 0.7.2, https://cran.r-project.org/web/packages/NEONiso. Accessed 15 Jun. 2025.
Previous versions and publish date:
0.4.0 (2021-03-19 12:00), 0.5.0 (2021-07-07 06:20), 0.5.1 (2021-08-12 20:10), 0.5.2 (2021-11-17 17:50), 0.5.3 (2022-01-03 22:20), 0.6.0 (2022-08-08 20:30), 0.6.1 (2022-09-22 21:50), 0.6.2 (2023-08-07 16:10), 0.6.3 (2023-08-23 20:20), 0.6.4 (2023-09-20 06:10), 0.7.0 (2024-04-05 06:43), 0.7.1 (2025-01-08 16:20)
Other packages that cited NEONiso R package
View NEONiso citation profile
Other R packages that NEONiso depends, imports, suggests or enhances
Complete documentation for NEONiso
Functions, R codes and Examples using the NEONiso R package
Some associated functions: NEONiso . R_to_delta . calculate_12CO2 . calculate_13CO2 . calibrate_ambient_carbon_Bowling2003 . calibrate_ambient_carbon_linreg . calibrate_ambient_water_linreg . calibrate_carbon . calibrate_carbon_bymonth . calibrate_carbon_reference_data . calibrate_standards_carbon . calibrate_standards_water . calibrate_water . calibrate_water_linreg_bymonth . calibrate_water_reference_data . carbon_regression_plots . convert_NEONhdf5_to_POSIXct_time . convert_POSIXct_to_NEONhdf5_time . copy_qfqm_group . copy_ucrt_group . correct_carbon_ref_cval . correct_carbon_ref_output . delta_to_R . estimate_calibration_error . extract_carbon_calibration_data . extract_water_calibration_data . filter_median_Brock86 . fit_carbon_regression . fit_water_regression . get_Rstd . ingest_data . loocv . manage_local_EC_archive . restructure_ambient_data . restructure_ambient_data2 . restructure_carbon_variables . restructure_water_variables . select_daily_reference_data . setup_output_file . swap_standard_isotoperatios . terrestrial_core_sites . terrestrial_relocatable_sites . validate_analyte . validate_output_file . water_isotope_sites . write_carbon_ambient_data . write_carbon_calibration_data . write_carbon_reference_data . write_qfqm . write_ucrt . write_water_calibration_data . write_water_reference_data . 
Some associated R codes: NEONiso.R . calibrate_ambient_carbon_Bowling2003.R . calibrate_ambient_carbon_linreg.R . calibrate_ambient_water_isotopes.R . calibrate_carbon.R . calibrate_carbon_bymonth.R . calibrate_standards_carbon.R . calibrate_standards_water.R . calibrate_water.R . calibrate_water_linreg_bymonth.R . filtering_functions.R . isotope_conversions.R . output_functions.R . quality_control.R . reference_data_extraction.R . reference_data_regression.R . reference_data_selection.R . restructure_data.R . standard_corrections.R . time_functions.R . utility_functions.R .  Full NEONiso package functions and examples
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