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HTGM3D  

Three Dimensional High Throughput 'GoMiner'
View on CRAN: Click here


Download and install HTGM3D package within the R console
Install from CRAN:
install.packages("HTGM3D")

Install from Github:
library("remotes")
install_github("cran/HTGM3D")

Install by package version:
library("remotes")
install_version("HTGM3D", "1.0")



Attach the package and use:
library("HTGM3D")
Maintained by
Barry Zeeberg
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2025-05-30
Latest Update: 2025-05-30
Description:
The Gene Ontology (GO) Consortium <https://geneontology.org/> organizes genes into hierarchical categories based on biological process (BP), molecular function (MF) and cellular component (CC, i.e., subcellular localization). Tools such as 'GoMiner' (see Zeeberg, B.R., Feng, W., Wang, G. et al. (2003) <doi:10.1186/gb-2003-4-4-r28>) can leverage GO to perform ontological analysis of microarray and proteomics studies, typically generating a list of significant functional categories. To capture the benefit of all three ontologies, I developed 'HTGM3D', a three-dimensional version of 'GoMiner'.
How to cite:
Barry Zeeberg (2025). HTGM3D: Three Dimensional High Throughput 'GoMiner'. R package version 1.0, https://cran.r-project.org/web/packages/HTGM3D. Accessed 12 Jun. 2025.
Previous versions and publish date:
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Other R packages that HTGM3D depends, imports, suggests or enhances
Complete documentation for HTGM3D
Functions, R codes and Examples using the HTGM3D R package
Full HTGM3D package functions and examples
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