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DeSciDe  

Tool for Unbiased Literature Searching and Gene List Curation
View on CRAN: Click here


Download and install DeSciDe package within the R console
Install from CRAN:
install.packages("DeSciDe")

Install from Github:
library("remotes")
install_github("cran/DeSciDe")

Install by package version:
library("remotes")
install_version("DeSciDe", "1.0.0")



Attach the package and use:
library("DeSciDe")
Maintained by
Cameron Douglas
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2025-04-29
Latest Update: 2025-04-29
Description:
Designed for genomic and proteomic data analysis, enabling unbiased PubMed searching, protein interaction network visualization, and comprehensive data summarization. This package aims to help users identify novel targets within their data sets based on protein network interactions and publication precedence of target's association with research context based on literature precedence. Methods in this package are described in detail in: Douglas (Year) <to-be-added DOI or link to the preprint>. Key functionalities of this package also leverage methodologies from previous works, such as: - Szklarczyk et al. (2023) <doi:10.1093/nar/gkac1000> - Winter (2017) <doi:10.32614/RJ-2017-066>.
How to cite:
Cameron Douglas (2025). DeSciDe: Tool for Unbiased Literature Searching and Gene List Curation. R package version 1.0.0, https://cran.r-project.org/web/packages/DeSciDe. Accessed 08 May. 2025.
Previous versions and publish date:
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Complete documentation for DeSciDe
Functions, R codes and Examples using the DeSciDe R package
Full DeSciDe package functions and examples
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